Daniels et al., Evolution of Afrotropical freshwater crab lineages obscured by morphological convergence (2006).pdf

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doi:10.1016/j.ympev.2006.02.022
Molecular Phylogenetics and Evolution 40 (2006) 227–235
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Evolution of Afrotropical freshwater crab lineages obscured
by morphological convergence
Savel R. Daniels a,b,¤ , Neil Cumberlidge c , Marcos Pérez-Losada a , Saskia A.E. Marijnissen d ,
Keith A. Crandall a,e
a Department of Integrative Biology, Brigham Young University, Provo, UT 84602, USA
b Department of Botany and Zoology, University of Stellenbosch, Private Bag X1, Matieland 7602, South Africa
c Department of Biology, Northern Michigan University, 1401 Presque Isle Ave, Marquette, MI 49855, USA
d Institute for Biodiversity and Ecosystem Dynamics, University of Amsterdam, Mauritskade 57, 1092 AD, Amsterdam, The Netherlands
e Monte L. Bean Museum, Brigham Young University, Provo, UT 84602-5255, USA
Received 17 October 2005; revised 21 February 2006; accepted 22 February 2006
Available online 18 April 2006
Abstract
nities among all freshwater crab
families. With an emphasis on the Afrotropical fauna that includes Africa, Madagascar, and the Seychelles, we test the proposed Gon-
dwanan cladogenesis of the group. Phylogenetic results demonstrate that contemporary distribution patterns of freshwater crab lineages
are incongruent with the expected area cladogram of continental fragmentation. Instead, our phylogenetic estimate and divergence time
estimation indicate a post-Gondwanan, early Cretaceous cladogenesis for freshwater crabs implying that the acquisition of a freshwater
lifestyle was achieved more recently. A dispersal hypothesis as opposed to vicariance appears to best explain the contemporary distribu-
tion pattern of this group. However, our results do not explicitly disprove a Gondwanan origin for the Afrotropical freshwater crabs.
Alarmingly, these results suggest that most of the currently recognized freshwater crab families are unreliable taxonomic groupings since
virtually no Afrotropical freshwater crab families formed monophyletic units thus obscuring inferred biogeographic relationships. Con-
vergence in characters associated with the terminal segment of the mandibular palp is clearly a pervasive obstacle in the taxonomy of this
group.
©
We use sequence data derived from six DNA gene loci to examine evolutionary and biogeographic a
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2006 Elsevier Inc. All rights reserved.
Keywords: Freshwater crabs; Biogeography; Cladogenesis; Dispersal; Vicariance; Convergence; Gondwana
1. Introduction
agascar separated (84–96 Mya), followed by the separation
of the granitic Seychelles archipelago from India
(68–65 Mya) while India continued drifting northeastward
towards the Eurasian plate, colliding with it 55–42 Mya,
during the early Eocene ( Briggs, 2003 ). Africa’s separation
from South America began 106 Mya and was completed by
84 Mya, during the late Cretaceous ( Goldblatt, 1993 ). Pro-
longed historic isolation of both Madagascar and the Sey-
chelles Islands in the Indian Ocean have led to near
complete endemicity in biotic assemblages that include
some spectacularly diverse adaptive radiations, resulting in
these areas being biodiversity hotspots. While the coloniza-
tion history of Madagascar’s vertebrate fauna has lately
er an ideal opportunity with which to test
biogeographic hypotheses derived from. Fragmentation of
Gondwana began during the mid-Mesozoic, 158–165 mil-
lion years ago (Mya), with the rifting of the Indo-Madagas-
car continent from Africa ending 121 Mya ( Rabinowitz
et al., 1983; Storey, 1995a,b ). Subsequently, India and Mad-
V
*
Corresponding author. Fax: +27 21 808 2405.
E-mail addresses: srd@sun.ac.za , sdaniels@byu.edu (S.R. Daniels).
1055-7903/$ - see front matter
©
2006 Elsevier Inc. All rights reserved.
doi:10.1016/j.ympev.2006.02.022
The distribution pattern of extinct and extant taxa asso-
ciated with fragmentation and rifting of ancient continental
landmasses o
203197580.005.png 203197580.006.png
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S.R. Daniels et al. / Molecular Phylogenetics and Evolution 40 (2006) 227–235
cant attention recently ( De Queiroz, 2005;
Nagy et al., 2003; Raxworthy et al., 2002; Sparks and
Smith, 2004; Vences et al., 2003; Yoder et al., 2003 ), how-
ever there are few studies focusing on the island’s endemic
invertebrate taxa. Consequently, phylogenetic and biogeo-
graphic a
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ences are derived under the assumption that the morpho-
logical characters used to unite each of the three
superfamilies are synapomorphic and to suggest that
freshwater crabs are monophyletic. In the absence of a
phylogenetic analysis for the group, the character state
remains unclear and may re
nities among invertebrates that also appear to
have undergone a radiation on Madagascar remain enig-
matic and the subject of vigorous debate ( Bott, 1955, 1965;
Ng et al., 1995; Ortmann, 1902; Rodriguez, 1986; Von
Sternberg et al., 1999 ).
The distribution and phylogenetic a
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ect sympleisiomorphy.
Noticeably, several taxonomic authorities have ques-
tioned the validity of the superfamilies and their stability
( Cumberlidge, 1999; Holthuis, 1979; Ng, 2004; Ng and
Sket, 1996; Ng and Tan, 1998; Von Sternberg et al., 1999 )
further fueling the biogeographic debate over freshwater
crab origins. This hypothesis suggests that ancient conti-
nental fragmentation from a ‘centre of origin’ is the main
factor that explains the contemporary distribution of
freshwater crabs.
Conversely, hypothesis two suggests a recent post-
Gondwana (Cretaceous) evolution of freshwater crabs from
a marine ancestor ( Carriol and Secretan, 1992; Colosi, 1921;
Glaessner, 1969; Von Sternberg et al., 1999 ). In addition this
post-Gondwana hypothesis implies dispersal from a wide-
spread monophyletic but polymorphic ancestral taxon to
explain the contemporary distribution of the group. Further-
more, the fossil record for freshwater crabs is relatively
young, with the oldest fossils being from the upper Miocence.
Nevertheless, aquatic invertebrates, including freshwater
crabs, have a notoriously poor paleontological record, and
the absence of geologically ancient fossils cannot be unequiv-
ocally used to disprove Gondwanan origins.
In an attempt to test the two hypotheses proposed for
the origin and radiation of these freshwater crabs, we col-
lected partial sequence data from six gene loci that included
four mitochondrial genes (two ribosomal loci, 16S rRNA
and 12S rRNA, two protein coding loci, cytochrome c oxi-
dase subunit I (COI), and cytochrome c oxidase subunit II
(COII)), as well as two nuclear (nDNA) loci, one protein
coding nuclear gene locus (histone H3), and one ribosomal
locus (18S rRNA) for all three freshwater crab super fami-
lies (Potamoidea, Gecarcinucoidea, and Pseudothelphusoi-
dea). Our study includes 65 taxa representing Potamoidea
(46 species), Gecarcinucoidea (18 species), and the Pseud-
othelphusoidea (1 species).
X
nities of other
freshwater crustaceans, such as freshwater cray
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sh, sup-
port the Gondwanan origin hypothesis ( Crandall et al.,
2000 ). Nevertheless, despite constituting 15% of brachyu-
ran diversity (Cumberlidge pers. comm.), evolutionary
relationships among freshwater crab families have
remained unresolved. Contemporary freshwater crabs
complete their life cycles exclusively in freshwater habi-
tats, are incapable of surviving prolonged exposure in
brackish or saline environments, and are characterized by
the production of a small number of yolk-rich (lecitho-
trophic) eggs followed by direct development and the
absence of free-swimming planktonic larval phases with
low assumed dispersal capacity ( Von Sternberg et al.,
1999 ). Two main hypotheses have been proposed to
explain the contemporary distribution of freshwater
crabs. Hypothesis one proposes an ancient Gondwanan
origin for the three freshwater crab superfamilies (Pota-
moidea, Gecarcinucoidea, and Pseudothelphusoidea) ( Ng
et al., 1995; Rodriguez, 1986 ). Morphological similarities
in diagnostic features of the terminal segment of the man-
dibular palp shared between African and South American
freshwater crab families and between African, Madaga-
scan, and Indian taxa have been used as evidence to sup-
port a Gondwanan origin ( Rodriguez, 1986 ). In addition,
Madagascar’s freshwater crab fauna includes taxa that
have long been assumed by some authors to be represen-
tative of transitional forms a
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ected by continental frag-
mentation, with some of the island’s taxa apparently
showing evolutionary a
V
nities with both African and
Indian taxa ( Bott, 1965; Ng et al., 1995 ; but see Cumber-
lidge and Von Sternberg, 2002 for an alternative view).
The presence of a single freshwater crab species on the
Seychelles Islands, placed in the same family present on
the Indian subcontinent, would imply an ancient biogeo-
graphic link between these areas, further supporting the
assumed Gondwanan origin of freshwater crabs ( Ng et al.,
1995 ). However, earlier taxonomic work undertaken by
Bott (1955) placed the single Seychelles freshwater crab
species as a congener of the East African Deckenia (as D.
alluaudi in the family Deckeniindae), underscoring the
taxonomic instability of the group. Additionally, the
occurrence of freshwater crabs on continental islands
(such as Madagascar, Seychelles, Socotra, and Sri Lanka)
and their complete absence from oceanic islands such as
the Comoros, Reunion, and Mauritius would be further
evidence of an ancient origin. These biogeographic infer-
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2. Materials and methods
2.1. Sample collection
Representatives of all the described Malagasy freshwater
crab samples (excluding only Boreas uglowi ) were obtained
from the Field Museum of Natural History, Chicago
(USA), from the Northern Michigan University collection
or from donations to authors by individuals. The following
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received signi
ve Afrotropical families were included: (1) four African
genera in Potamonautidae (23 Potamonautes , 1 Potamone-
mus , 2 Sudanonautes , and 1 Liberonautes ), these included
sequence data from 14 southern African Potamonautes spe-
cies from an earlier study ( Daniels et al., 2002 ), which were
downloaded from GenBank (12S rRNA, 16S rRNA, and
S.R. Daniels et al. / Molecular Phylogenetics and Evolution 40 (2006) 227–235
229
COI mtDNA) and included in the present analysis, and
sequenced for the outstanding three gene fragments. Five
Malagasy genera in Potamonautidae (1 Madagapotamon , 4
Hydrothelphusa , 1 Marojejy , 2 Malagasya , 1 Skelosophusa ,
and 1 Foza raimundi ), the single genus in the Platythel-
phusidae (1 Platythelphusa ), the single genus in Deckenii-
dae (1 Deckenia ); Potamidae (1 Socotra —the only
Afrotropical genus in the family) and Gecarcinucidae (1
Seychellum —the only Afrotropical genus in the family). In
addition, we included representatives of the families Pota-
midae (1 Potamon , 1 Isolapotamon , 1 Johara , and 2 Geothel-
phusa ), the Oriental Gecarcinucidae (4 Barythelphusa , 1
Gecarcinucus , 1 Gubernatoriana , 1 Sartoriana , and 1 Phric-
othelphusa ), and the Oriental and Australasian family Para-
thelphusidae (1 Ceylonthelphusa , 2 Parathelphusa , 2
Rouxana , 1 Sayamia , and 1 Oziothelphusa ) as well as a sin-
gle representative of the Neotropical Pseudothelphusidae,
Guinotia dentata . A list of the voucher specimens of the taxa
sequenced in this study, together with their museum cata-
logue numbers and localities is provided in Table 1 .
Table 1
List of voucher specimens of freshwater crab taxa sequenced in the pres-
ent study and collection localities
Species
Museum catalogue number Locality
Johora tiomanensis
ZRC 1999.0899
Malaysia
Isolapotamon consobrinum
ZRC 2000.2215
Borneo
Geothelphusa albogilva
ZRC 1999.0202
Taiwan
Celonthelphusa rugosa
ZRC 1998.606
Sri Lanka
Parathelphusa maculata
ZRC 2000.2110
Singapore
Sayamia sexpunctata
ZRC 2001.1101
Malaysia
Phricotelphusa limula
ZRC 2005.107
Thailand
Skelosophusa eumeces
FMNH 11059
Madagascar
Hydrothelphusa
bombetokensis
FMNH 6878
Madagascar
Marojejy longimerus
FMNH 4656
Madagascar
Madagapotamon humberti
FMNH 11049
Madagascar
Hydrothelphusa goudoti
FMNH 4652
Madagascar
Hydrothelphusa
madagascariensis
FMNH 7591
Madagascar
Foza raimundi
FMNH 7438
Madagascar
Gecarcinus jaquemonti
NMU A28.9.2004.1
India
Barythelphusa cunicularis 1
NMU B28.9.2004.1
India
Barythelphusa jaquemonti 1
NMU 06.10.2004.1
India
Barythelphusa jaquemonti 2
NMU 19.11.2004.1
India
2.2. Outgroup selection
Barythelphusa jaquemonti 3
Unaccessioned
India
Gubernatoriana gubernatorus NMU 20.11.2004.1
India
Barythelphusa cunicularis 2
NMU 10.4.2004.1
India
erent families were used as out-
group taxa; these included the freshwater crab species Dilo-
carcinus laevifrons (Trichodactylidae), and two marine
crabs Pachygrapsus marmoratus (Grapsidae) and Carcinus
maenas (Portunidae). A number of authors ( Martin and
Davis, 2001; Rodriguez, 1992; Von Sternberg, 1997; Von
Sternberg et al., 1999; Von Sternberg and Cumberlidge,
2003 ) have suggested that Trichodactylidae is sister to Por-
tunidae while the remainder of the three freshwater super
families are potentially monophyletic, hence Trichodactyli-
dae along with two additional marine taxa were used as
outgroups.
DNA was extracted from leg muscle or gill tissue using
the Qiagen DNeasy tissue kit followed by polymerase chain
reaction (PCR) with the following primer pairs; 16S rRNA
( Cunningham et al., 1992 ); 12S rRNA ( Kocher et al., 1989 ),
cytochrome c oxidase subunit I—COI ( Folmer et al., 1994 ),
cytochrome c oxidase subunit II—COII ( Simon et al.,
1994 ), histone three (H3) ( Colgan et al., 1998 ), and 18S
rRNA ( Whiting et al., 1997 ). The DNA was denatured for
94 °C for 5 min, followed by 40 cycles at 94 °C for 40 s,
annealing temperatures between 48 and 42 °C for 45 s and
an extension at 72 °C for 1 min, with a
V
Barythelphusa sp. 1
NMU 11.10.2004.1
India
Barythelphusa sp. 2
NMU 11.10.2004.1
India
Oziothelphusa senex
NMU 07.10.2004.1
India
Sartoriana spinigera
NMU 09.09.2003.1
India
Rouxana minima
NMU A21.09.2000.1
Papua New
Guinea
Rouxana ingrami
NMU B21.09.2000.1
Papua New
Guinea
Parathelphusa sp.
NMU 16.08.2003.1
Malaysia
Sudanonautes Xoweri
NMU 03.2004.1
Gabon
Potamonautes ecorssei
NMU 07.01.2003.1
Mali
Potamonautes platynotus
NMU 23.04.2003.6
Tanzania
Guinotia dentata
NMU 04.01.2004.1
West Indies
Potamonautes odhnerhi
NMU 14.07.2004
Kenya
Potamonautes new sp.
NMU 18.10.2003
Kenya
Deckenia imitatrix
NMU 1998.1
Kenya
Sudanonautes aubryi
NMU 23.04.1984A
Nigeria
Potamonemus sachi
NMU 09.04.1983
Cameroon
Liberonautes rubigimanus
NMU 18.04. 1989
Liberia
Seychellum alluaudi
MRAC 53.653
Seychelles
Socotra pseudocardisoma
NMU 10.1998.1
Socotra
Potamonautes raybouldi
ZMA Crust. De. 204684
Tanzania
Potamonautes lirrangensis
ZMA Crust. De. 204681
DRC
Potamonautes emini
ZMA Crust. De. 204680
DRC
Potamonautes niloticus
ZMA Crust. De. 204683
Uganda
Platythelphusa armata
ZMA Crust. De. 204685
Tanzania
nal extension phase
at 72 °C for 10 min. PCR products were gel puri
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Carcinus maenas
BYUKC 3044
Spain
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ed with a
Pachygrapsus marmoratus
BYUKC 3045
Spain
Dilocarcinus laevifrons
NMU 13.12.2003.1
Peru
cation kit followed by direct sequenc-
ing on an ABI 3730 XL automated sequencer. DNA
sequences for all six loci have the following GenBank
Accession Nos., 12S rRNA (AY803490–AY803529,
AY919073–AY919085), 16S rRNA (AY803530–
AY803567, AY919086–AY919095), COI (AY803568–
AY803593, AY919108–AY919116), COII (AY803594–
AY803635, AY919117–AY919125), 18S rRNA
(AY803636–AY803672, AY919096–AY919107), and H3
(AY803673–AY803723, AY919126–138).
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Potamon Xuviatilis
Unaccessioned
Italy
Zoological Reference Collection of the RaZes Museum of Biodiversity
Research, National University of Singapore (ZRC); Field Museum of Natu-
ral History, Chicago (FMNH); Northern Michigan University, Marquette
(NMU); Zoological Museum of Amsterdam, Crustacean Department
(ZMA); KC, Brigham Young University, Utah (BYU); and Musée Royal
de l’Afrique Central, Tervuren (MRAC). The 14 southern African Potamo-
nautes species sequenced were not deposited in a museum collection and
sequences were taken from GenBank for 12S, 16S, and COI mtDNA. The
abbreviation DRC stands for Democratic Republic of the Congo.
Three crabs from di
Qiagen PCR gel puri
203197580.007.png
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S.R. Daniels et al. / Molecular Phylogenetics and Evolution 40 (2006) 227–235
2.3. Alignment and phylogenetic analysis
imated twice under the Bayesian approach and included a
burn-in period of 5 £ 10 5 steps, after which 10 6 samples
were collected every 100 accepted states. The similarity of
these two approximations indicated that the Markov
chains successfully converged. Likelihood estimations were
performed also twice using small values of 1e¡6 and
0.5e¡6 in the di
The three ribosomal gene sequences 16S rRNA, 12S
rRNA mtDNA, and 18S rRNA (652 bp) were aligned using
ClustalX ( Thompson et al., 1997 ) and manually adjusted
where mismatches were made, while the two protein coding
loci COI and COII (COI—610 bp and COII—447 bp) as
well as the nuclear markers histone three (H3) (301 bp) were
aligned manually. Large insertion and deletions that could
not be aligned with con
erence approximation of derivatives and
similar results were also encountered. Three independent
calibrations were used specifying upper and lower bounds
for the Bayesian approach and
dence for 12S and 16S rRNA
mtDNA were deleted from the phylogenetic analysis, these
resulted in two short sequences that were 272 and 352 bp,
respectively. Phylogenetic trees were estimated with
PAUP*4.0b10 ( Swo
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xed ages for the likelihood
approach. A detailed discussion of the method is outlined
in Yang and Yoder (2003) and used by Nagy et al. (2003),
Porter et al. (2005), Vences et al. (2003), Yang (2004), and
Yoder et al. (2003) . Calibration point 1 (on Fig. 1 ) repre-
sents the maximum age estimation of the Potamon fossil
from the upper Miocene (24 Mya), calibration point 2 (on
Fig. 1 ) represents the geological age of the Seychelles Island
at 70 Mya, while calibration point 3 (on Fig. 1 ) represents
the Potamonautes niloticus fossil from six My old sediments
from the lower Miocene of Kenya. The two fossil calibra-
tion points were set as the lower limit, while the geological
age of the Seychelles was used as the upper limit in the
divergence time estimations.
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ord, 2002 ), using parsimony (MP) and
maximum likelihood (ML) and with MrBayes 3.0b4 ( Ron-
quist and Huelsenbeck, 2003 ) using Bayesian inferences
coupled with Markov chain Monte Carlo techniques.
For the MP and ML analysis, heuristic searches with
TBR branch swapping and 100 random additions of taxa
were performed. Nodal support for MP was estimated by
bootstrapping analyzing 10,000 pseudo-replicates of data
sets, while due to computational constraints only 100
pseudo-replicates were performed for ML. For each Bayes-
ian analysis 10 Markov chains were run, with each chain
started from a random tree and running for six million gen-
erations and sampling from the chain every 5000 trees. In
the combined Bayesian analyses, data sets were partitioned
and independent models were selected for each gene using
unlinked parameters. A 50% majority rule consensus tree
was generated from the trees retained (after the burn-in
trees were discarded), with posterior probabilities for each
node estimated by the percentage of time the node was
recovered. Convergence and mixing were monitored using
the program Tracer v1.2 ( Rambaut and Drummond, 2004 ).
For the ML and Bayesian analyses, MODELTEST
( Posada and Crandall, 1998 ) was used to
V
3. Results and discussion
nd the appropri-
ate substitution model of evolution for each gene and the
combined data set. The best-
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Phylogenetic analysis performed on the mitochondrial
and nuclear genes prior to combination into a single data
matrix recovered highly congruent topologies (independent
mt and nDNA tree topologies not shown). For MP, 956
parsimony informative characters were present that recov-
ered a single tree with a tree length of 7346 steps, with a
consistency index (CI) of 0.24 and a retention index (RI) of
0.47. The MP topology was identical to the ML and Bayes-
ian topologies. For the combined data set the substitution
model GTR (General Time-Reversible) + I (proportion of
invariable sites D 0.4587) +
(gamma distribution shape
parameter D 0.6915) had the following parameters, base fre-
quencies A D 0.3378, C D 0.1402, G D 0.2017, and
T D 0.3203, the rate matrix R (a) [A–C]D 0.4722, R (b)
[A–G] D 6.2458, R (c) [A–T]D 1.5699, R (d) [C–G]D 1.5106,
R (e) [C–T] D 2.5940, and R (f) [G–T] D 1.00.
Results derived from several phylogenetic methods (par-
simony, maximum likelihood, and Bayesian inference)
( Fig. 1 ) demonstrate that the Afrotropical freshwater crabs
samples are monophyletic, based on our taxon sampling.
However, none of the Afrotropical and Oriental families
formed natural groups, suggesting the arti
t maximum likelihood score
was chosen using the Akaike Information Criterion (AIC)
since this reduced the amount of unnecessary parameters
that contribute little to describing the data by penalizing
more complex models ( Bernham and Anderson, 2002;
Nylander et al., 2004 ). The Shimodaira and Hasegawa
(1999) test and posterior probability as implemented in
PAUP*4.0b10 ( Swo
W
ord, 2002 ) was used to test the tradi-
tional taxonomic designations (comparing the uncon-
strained tree to the null hypothesis).
V
cial nature of
the current taxonomic designations. For example, the
monophyletic Malagasy Potamonautidae formed a distinct
clade from the African Potamonautidae while the East
African Platythelphusidae was deeply nested within the
African Potamonautidae. We did not recover a sister taxon
relationship between the Seychellian and Indian freshwater
crabs despite their present assignment to the same family
(Gecarcinucidae); that is further incongruent with a Gon-
dwanan fragmentation hypothesis. Instead, the Seychelles
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2.4. Divergence time estimation
Divergence times were estimated under the multi-locus
Bayesian method of Thorne et al. (1998) and Thorne and
Kishino (2002) , as implemented in the multidivtime pack-
the likelihood heuristic rate-smoothing algorithm of Yang
(1997) , as implemented in PAML3.14b3 ( Yang, 1997; Yang
and Yoder, 2003 ). The posterior distributions were approx-
V
S.R. Daniels et al. / Molecular Phylogenetics and Evolution 40 (2006) 227–235
231
Pachygrapsusmarmoratus
Dilocarcinuslaevifrons
Carcinus maenas
OUTGROUPS
100 / 1
Barythelphusasp 1
Bar ythelphusacunicularis1
Ba rythelphusasp 2
Barythelph usa cunicularis2
Baryth elphusa jacquemontii1
89 / 1
94
79 / 1
100
78
69 / 1
100 / 1
Barythelphusajacquemontii2
Ba rythelphusa jacquemontii3
100
India
*
63/ 1
Sartori anaspinigera
Gecarcinucusjacquemontii
Gubernatorianagubernatoris
Ceylonthelphusarugosa
Oziothe lphusasenex
Parathelphusamaculata
Parathelphusasp
Sayamiasexpunctata
Rouxana ingrahmi
Rouxanaminima
Phricotelphusa limula
Guinotiadentata
S ocotrapseudocardisoma
Johora tiomanensis
Geothelph usasp
Geothelphusaalbogilva
Potamonfluviatilis
Isolapotamon consobrinum
Deckenia imitatrix
Seychellumalluaudi
Madagap otamonhumberti
Foza raimundi
Hydrothelphusagoudoti
Hydrothelphusaagilis
Hydrothelphusamadagascariensis
Hy drothelphusabombetokensis
Ma rojejylongimerus
S kelosophusaeumeces
Ma lagasyaantongilensis
Malagasyagoodmani
Potamonemussachsi
Sudanonautesfloweri
S udanonautesaubryi
Liberona utesrubigimanus
Potamonautescalcaratus
Potamonautesobesus
Pota monauteslirrangensis
P otamonautesplatynotus
Potamonautes raybouldi
Platythelphusaarmata
P otamonautesniloticus
Potamonautesemini
P otamonautesnew sp
P otamonautesodhneri
Potamonautesecorssei
Po tamonautesclarus
Potamonautesdepressus
P otamonautesbrincki
Potamonautesparvispina
P otamonautesparvicorpus
Pota monautesdentatus
Potamonauteslividus
Potamonautesgranularis
Potamonautesperlatus
Potamonautessidneyi
Potamonautesbayonianus
Potamonautesunispinus
Potamonauteswarreni
*
6 9 / 1
76 / 1
Asia and
Papua New
Guinea
64 /1
91
*
100 / 1
98
Freshwater crab families
Gecarcinucidae
Parathelphusidae
Potamindae
Pseudothelphusidae
Decke niidae
Potamonaut idae
Platythelphu sidae
India
*
* *
*
West Indies
Socotra
Asia
79 / 1
91
1
Europ Asia
*
Africa
100 / 1
*
2
100
Seychelles
77 / 1
*
*
70
100 / 1
82 / 1
94 /1
ML / BI
100
87 / 1
*
85
77
MP
74 / 1
Madagascar
*
81 / 1
69
Afrotropical fauna
100 / 1
75 / 1
91
66
99 / 1
75 / 1
1 00 / 1
*
99 / 1
99
99 / 1
99
95
3
Africa
70 / 1
100 / 1
*
100
97 / 1
98
98 / 1
9 0 / 1
98 / 1
95
80
95
100 / 1
90 / 1
100 / 1
100
100
0.05 substitutions / site
100 / 1
98
Fig. 1. A ML topology derived from the model GTR + I + , with a likelihood score of 36685.95. The tree was rooted using three outgroups ( Dilocarcinus
laevifrons , Pachygrapsus marmoratus , and Carcinus maenas ). The values above each node represent the bootstrap values for ML and posterior probability
for Bayesian inferences respectively, while the values below each node represent the MP bootstrap values. Nodes marked with an asterisk had bootstrap
values of <60% and posterior probabilities of <0.95.
taxon was closely related to an East African family (Decki-
niidae), and formed a clade sister to the Malagasy freshwa-
ter crabs. Among the Indian and Asian Gecarcinucidae and
Parathelphusidae we further found no evidence of distinct
family groups. The estimated phylogram ( Fig. 1 ) is com-
pletely irreconcilable with the expected area cladogram of
continental fragmentation. Enforcing a strict Gondwanan
fragmentation area cladogram consistently recovered a
topology that was statistically signi
dence ( Table 2 ) given these data. The
evolutionary distinctiveness of the Afrotropical families
from the Neotropical (South American and Meso-Ameri-
can) and the Oriental and Australasian families provides
further evidence for a post-Gondwanan evolution of these
freshwater crabs. A post-Gondwanan origin of Afrotropi-
cal freshwater crabs is further supported by the shallow
corrected sequence divergence values between the African
and Malagasy freshwater crab families. Divergence time
W
W
cantly worse, and can
98
be rejected with con
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